Summarize environment names by group
Source:R/environment_stratification_helpers.R
environment_summary_by_group.RdSummarize environment names by group
Examples
pheno <- read_breedbase_file(
system.file("extdata", "breedbase_pheno.csv", package = "breedtools")
)
prepared <- prepare_environment_stratification_data(pheno, trait = "fresh root yield")
lin <- lin_group_environments(prepared$data)
membership <- add_environment_metadata(lin$group_membership, prepared$env_info)
environment_summary_by_group(lin$group_summary, membership)
#> group_id environments locations
#> 1 Group_1 Geneva / GEN_2025_yield, Ithaca / ITH_2025_yield Geneva, Ithaca
#> 2 Group_2 Ibadan / IBA_2025_yield, Ubiaja / UBI_2025_yield Ibadan, Ubiaja
#> trials years n_env n_genotypes r_eff ss_ge df_ge
#> 1 GEN_2025_yield, ITH_2025_yield 2 12 2 24.84937 11
#> 2 IBA_2025_yield, UBI_2025_yield 2 12 2 48.65081 11
#> ms_ge message mse_error df_error f_value p_value compatible
#> 1 2.259034 OK 1.193709 22 1.8924496 0.09774358 TRUE
#> 2 4.422801 OK 5.615979 22 0.7875387 0.64998303 TRUE